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Plateforme Bioinformatique LIPM-SPE

Jérôme Gouzy, Emmanuel Courcelle, Sébastien Carrere, Erika Sallet, Ludovic Cottret, Ludovic Legrand et al.

[Publications]   [Posters]

Bioinformatics resources

Narcisse: a mirror view of conserved syntenies
collaboration with Thomas Faraut - Laboratoire de Genetique Cellulaire
download Narcisse
LeARN: a platform for annotating, clustering and editing ncRNA
collaboration with Christine Gaspin and Thomas Schiex - Unite de Biometrie et Intelligence Artificielle
Remora: a web server implemented according to the BioMoby web-service specifications, providing life science researchers with an easy-to-use workflow generator and launcher, a repository of predefined workflows and a survey system.
FrameDP: sensitive peptide detection on noisy matured sequences
collaboration with Thomas Schiex - Unite de Biometrie et Intelligence Artificielle
LEGOO: a bioinformatics gateway towards integrative legume biology
HeliaGene: a bioinformatics portal for Helianthus sp. genomics

Specialized databases and tools

Bacteria

Direct access to public resources using keyword:

Plants

Direct access to public resources using keyword:

Oomycetes

Direct access to public resources using keyword:

Computer science resources

Paraloop: l'interface d'accès aux ressources de calculs
Cours C++: Introduction au C++ et à la programmation objet
BioMOBY::Perl Web-services development framework
BioMOBY Resources (web-services and tools)
Mobyle portal: a portal for bioinformatics analyses.
FATAL: Functional Analyses porTAL

Intranet

Knowledge: la base de connaissances
BDMI: Base de Donnees de Mutants d'Insertion
Base de donnees pour les puces phylogenie de R. solanacearum